De novo motifs for CGI CAGE clusters overlapping annotated promoters
Total target sequences = 15841Total background sequences = 32529
Rank | Motif | P-value | Enrichment | Best Match and Details |
1
|  | 1e-418 | 7274.0 (45.92%) targets 9567.8 (29.41%) backgr. | SP1.p2.SwissRegulon.nucfreq (0.96) More Info/Top 5 Known Motifs |
2
|  | 1e-282 | 5766.0 (36.40%) targets 7689.8 (23.64%) backgr. | Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer (0.96) More Info/Top 5 Known Motifs |
3
|  | 1e-263 | 3727.0 (23.53%) targets 4334.9 (13.33%) backgr. | MA0060.1_NFYA (0.97) More Info/Top 5 Known Motifs |
4
|  | 1e-180 | 5747.0 (36.28%) targets 8428.6 (25.91%) backgr. | ENCODE UW.Motif.0068 (0.72) More Info/Top 5 Known Motifs |
5
|  | 1e-166 | 2347.0 (14.82%) targets 2667.8 (8.20%) backgr. | NRF1(NRF)/MCF7-NRF1-ChIP-Seq/Homer (0.95) More Info/Top 5 Known Motifs |
6
|  | 1e-160 | 5098.0 (32.18%) targets 7412.9 (22.79%) backgr. | CREB1_f1_HM09 (0.92) More Info/Top 5 Known Motifs |
7
|  | 1e-131 | 804.0 (5.08%) targets 613.9 (1.89%) backgr. | ENCODE UW.Motif.0497_novel (0.77) More Info/Top 5 Known Motifs |
8
|  | 1e-113 | 1214.0 (7.66%) targets 1226.3 (3.77%) backgr. | TYY1_f2_HM09 (0.98) More Info/Top 5 Known Motifs |
9
|  | 1e-103 | 5136.0 (32.42%) targets 8058.4 (24.77%) backgr. | MA0330.1_MBP1::SWI6 (0.71) More Info/Top 5 Known Motifs |
10
|  | 1e-91 | 2469.0 (15.59%) targets 3366.4 (10.35%) backgr. | MA0289.1_DAL80 (0.68) More Info/Top 5 Known Motifs |
11
|  | 1e-89 | 3578.0 (22.59%) targets 5331.7 (16.39%) backgr. | MA0416.1_YAP3 (0.85) More Info/Top 5 Known Motifs |
12
|  | 1e-82 | 4629.0 (29.22%) targets 7357.1 (22.62%) backgr. | AHR_si_HM09 (0.68) More Info/Top 5 Known Motifs |
13
|  | 1e-80 | 5811.0 (36.68%) targets 9636.8 (29.63%) backgr. | MA0365.1_RFX1 (0.78) More Info/Top 5 Known Motifs |
14
|  | 1e-79 | 2921.0 (18.44%) targets 4258.9 (13.09%) backgr. | MA0185.1_Deaf1 (0.65) More Info/Top 5 Known Motifs |
15
|  | 1e-72 | 4761.0 (30.05%) targets 7730.1 (23.76%) backgr. | MA0365.1_RFX1 (0.83) More Info/Top 5 Known Motifs |
16
|  | 1e-72 | 2411.0 (15.22%) targets 3434.4 (10.56%) backgr. | MA0401.1_SWI4 (0.65) More Info/Top 5 Known Motifs |
17
|  | 1e-66 | 2114.0 (13.34%) targets 2976.9 (9.15%) backgr. | Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer (0.84) More Info/Top 5 Known Motifs |
18
|  | 1e-61 | 1737.0 (10.96%) targets 2375.6 (7.30%) backgr. | MA0430.1_YLR278C (0.73) More Info/Top 5 Known Motifs |
19
|  | 1e-60 | 1169.0 (7.38%) targets 1443.1 (4.44%) backgr. | MF0002.1_bZIP_CREB/G-box-like_subclass (0.81) More Info/Top 5 Known Motifs |
20
|  | 1e-57 | 4043.0 (25.52%) targets 6588.7 (20.26%) backgr. | Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer (0.67) More Info/Top 5 Known Motifs |
21
|  | 1e-54 | 902.0 (5.69%) targets 1060.7 (3.26%) backgr. | ZBTB33/GM12878-ZBTB33-ChIP-Seq/Homer (0.81) More Info/Top 5 Known Motifs |
22
|  | 1e-51 | 4269.0 (26.95%) targets 7099.8 (21.83%) backgr. | MA0131.1_MIZF (0.68) More Info/Top 5 Known Motifs |
23
|  | 1e-50 | 4664.0 (29.44%) targets 7869.5 (24.19%) backgr. | MA0242.1_run::Bgb (0.72) More Info/Top 5 Known Motifs |
24
|  | 1e-50 | 1825.0 (11.52%) targets 2627.6 (8.08%) backgr. | MA0266.1_ABF2 (0.66) More Info/Top 5 Known Motifs |
25
|  | 1e-49 | 5080.0 (32.07%) targets 8696.8 (26.74%) backgr. | PB0097.1_Zfp281_1 (0.88) More Info/Top 5 Known Motifs |
26
|  | 1e-49 | 3876.0 (24.47%) targets 6391.2 (19.65%) backgr. | MA0039.2_Klf4 (0.69) More Info/Top 5 Known Motifs |
27
|  | 1e-46 | 3563.0 (22.49%) targets 5846.0 (17.97%) backgr. | ENCODE UW.Motif.0021_novel (0.63) More Info/Top 5 Known Motifs |
28
|  | 1e-45 | 1810.0 (11.43%) targets 2653.2 (8.16%) backgr. | MA0412.1_UME6 (0.72) More Info/Top 5 Known Motifs |
29
|  | 1e-45 | 4013.0 (25.33%) targets 6719.3 (20.66%) backgr. | MA0012.1_br_Z3 (0.63) More Info/Top 5 Known Motifs |
30
|  | 1e-43 | 1154.0 (7.28%) targets 1544.5 (4.75%) backgr. | TFEB_f1_HM09 (0.88) More Info/Top 5 Known Motifs |
31
|  | 1e-43 | 2599.0 (16.41%) targets 4094.5 (12.59%) backgr. | MYB.p2.SwissRegulon.nucfreq (0.65) More Info/Top 5 Known Motifs |
32
|  | 1e-43 | 4343.0 (27.41%) targets 7376.0 (22.68%) backgr. | MA0428.1_YKL222C (0.72) More Info/Top 5 Known Motifs |
33
|  | 1e-41 | 3931.0 (24.81%) targets 6615.7 (20.34%) backgr. | MA0282.1_CEP3 (0.75) More Info/Top 5 Known Motifs |
34
|  | 1e-40 | 4749.0 (29.98%) targets 8223.5 (25.28%) backgr. | POL013.1_MED-1 (0.78) More Info/Top 5 Known Motifs |
35
|  | 1e-39 | 3527.0 (22.26%) targets 5887.3 (18.10%) backgr. | MA0365.1_RFX1 (0.84) More Info/Top 5 Known Motifs |
36
|  | 1e-38 | 1997.0 (12.61%) targets 3073.5 (9.45%) backgr. | ENCODE UW.Motif.0087 (0.64) More Info/Top 5 Known Motifs |
37
|  | 1e-36 | 3723.0 (23.50%) targets 6305.8 (19.39%) backgr. | MA0396.1_STP3 (0.72) More Info/Top 5 Known Motifs |
38
|  | 1e-34 | 2268.0 (14.32%) targets 3616.5 (11.12%) backgr. | MA0397.1_STP4 (0.69) More Info/Top 5 Known Motifs |
39
|  | 1e-33 | 881.0 (5.56%) targets 1175.5 (3.61%) backgr. | EGR3_f1_HM09 (0.68) More Info/Top 5 Known Motifs |
40
|  | 1e-33 | 4419.0 (27.89%) targets 7714.6 (23.72%) backgr. | PB0034.1_Irf4_1 (0.67) More Info/Top 5 Known Motifs |
41
|  | 1e-32 | 4109.0 (25.94%) targets 7138.7 (21.95%) backgr. | MA0368.1_RIM101 (0.57) More Info/Top 5 Known Motifs |
42
|  | 1e-32 | 1233.0 (7.78%) targets 1790.5 (5.50%) backgr. | AHR_si_HM09 (0.63) More Info/Top 5 Known Motifs |
43
|  | 1e-31 | 551.0 (3.48%) targets 661.1 (2.03%) backgr. | PB0055.1_Rfx4_1 (0.87) More Info/Top 5 Known Motifs |
44
|  | 1e-29 | 684.0 (4.32%) targets 887.8 (2.73%) backgr. | MA0131.1_MIZF (0.68) More Info/Top 5 Known Motifs |
45
|  | 1e-27 | 1389.0 (8.77%) targets 2113.8 (6.50%) backgr. | ENCODE UW.Motif.0053_novel (0.69) More Info/Top 5 Known Motifs |
46
|  | 1e-27 | 4323.0 (27.29%) targets 7647.5 (23.51%) backgr. | EPAS1_si_HM09 (0.70) More Info/Top 5 Known Motifs |
47
|  | 1e-27 | 503.0 (3.18%) targets 609.9 (1.88%) backgr. | MA0325.1_LYS14 (0.81) More Info/Top 5 Known Motifs |
48
|  | 1e-26 | 779.0 (4.92%) targets 1066.9 (3.28%) backgr. | PB0203.1_Zfp691_2 (0.62) More Info/Top 5 Known Motifs |
49
|  | 1e-26 | 584.0 (3.69%) targets 750.2 (2.31%) backgr. | MA0283.1_CHA4 (0.80) More Info/Top 5 Known Motifs |
50
|  | 1e-24 | 742.0 (4.68%) targets 1024.3 (3.15%) backgr. | DDIT3_f1_HM09 (0.74) More Info/Top 5 Known Motifs |
51
|  | 1e-24 | 873.0 (5.51%) targets 1249.0 (3.84%) backgr. | PH0040.1_Hmbox1 (0.68) More Info/Top 5 Known Motifs |
52
|  | 1e-24 | 689.0 (4.35%) targets 937.5 (2.88%) backgr. | FOXN1.p2.SwissRegulon.nucfreq (0.82) More Info/Top 5 Known Motifs |
53
|  | 1e-20 | 791.0 (4.99%) targets 1152.5 (3.54%) backgr. | CXXC1_si_HM09 (0.69) More Info/Top 5 Known Motifs |
54
|  | 1e-16 | 921.0 (5.81%) targets 1431.8 (4.40%) backgr. | PO6F1_f1_HM09 (0.68) More Info/Top 5 Known Motifs |
