Detailed information for motif15

P-value:1e-72
ln P-value:-1.675e+02
Information content per bp:1.876
Number of target sequences with motif:4761.0
Percentage of target sequences with motif:30.05%
Number of background sequences with motif:7730.1
Percentage of background sequences with motif:  23.76%
Average position of motif in targets:319.5 +/- 234.6bp
Average position of motif in background:279.6 +/- 208.3bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.23
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0365.1_RFX1

Match rank:  1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:KCGGTTGCTAG
--GGTTGCCA-
  

PB0056.1_Rfxdc2_1

Match rank:  2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:KCGGTTGCTAG----
NCCGTTGCTANGNGN
  

PB0055.1_Rfx4_1

Match rank:  3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:KCGGTTGCTAG----
NNCGTTGCTATGGNN
  

PB0054.1_Rfx3_1

Match rank:  4
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----KCGGTTGCTAG--------
NTNNNNNGTTGCTANGGNNCANA
  

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match rank:  5
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:KCGGTTGCTAG--
-CTGTTGCTAGGS