Detailed information for motif45

P-value:1e-27
ln P-value:-6.429e+01
Information content per bp:1.589
Number of target sequences with motif:1389.0
Percentage of target sequences with motif:8.77%
Number of background sequences with motif:2113.8
Percentage of background sequences with motif:  6.50%
Average position of motif in targets:353.0 +/- 269.8bp
Average position of motif in background:281.8 +/- 193.4bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ENCODE UW.Motif.0053_novel

Match rank:  1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GCGAGTGAGAGA
---AGAGAGAG-
  

MA0205.1_Trl

Match rank:  2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCGAGTGAGAGA
--GAGAGAGCAA
  

EP300.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCGAGTGAGAGA
GCAGGGAGTGNGNG-
  

NR0B1_si_HM09

Match rank:  4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCGAGTGAGAGA
--GCGTGGGAGA
  

ENCODE UW.Motif.0423_novel

Match rank:  5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GCGAGTGAGAGA------
-----TNAGAGANNNTNG