Detailed information for motif49

P-value:1e-26
ln P-value:-6.001e+01
Information content per bp:1.679
Number of target sequences with motif:584.0
Percentage of target sequences with motif:3.69%
Number of background sequences with motif:750.2
Percentage of background sequences with motif:  2.31%
Average position of motif in targets:329.5 +/- 258.9bp
Average position of motif in background:267.4 +/- 211.9bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.01
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0283.1_CHA4

Match rank:  1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGCCATAG
TCTCCGCC----
  

PB0164.1_Smad3_2

Match rank:  2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTCCGCCATAG--
TACGCCCCGCCACTCTG
  

MA0354.1_PDR8

Match rank:  3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGCCATAG
ATCTCCGN-----
  

MA0430.1_YLR278C

Match rank:  4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGCCATAG
AACTCCGG-----
  

PAX5_si_HM09

Match rank:  5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGCCATAG
CCTCAGCC----