Detailed information for motif33

P-value:1e-41
ln P-value:-9.667e+01
Information content per bp:1.977
Number of target sequences with motif:3931.0
Percentage of target sequences with motif:24.81%
Number of background sequences with motif:6615.7
Percentage of background sequences with motif:  20.34%
Average position of motif in targets:313.8 +/- 247.3bp
Average position of motif in background:277.1 +/- 214.5bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0282.1_CEP3

Match rank:  1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTTCCGACTT
TTTCCGAG--
  

PH0066.1_Hoxc11

Match rank:  2
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGACTT--
NNNTTTTACGACNTTN
  

PH0047.1_Hoxa11

Match rank:  3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGACTT--
NNGTTTTACGACTTTA
  

MA0391.1_STB4

Match rank:  4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTTCCGACTT
-TTCCGAG--
  

PH0065.1_Hoxc10

Match rank:  5
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTTCCGACTT--
ANNTTTTACGACNTNN