Detailed information for motif42

P-value:1e-32
ln P-value:-7.389e+01
Information content per bp:1.676
Number of target sequences with motif:1233.0
Percentage of target sequences with motif:7.78%
Number of background sequences with motif:1790.5
Percentage of background sequences with motif:  5.50%
Average position of motif in targets:317.3 +/- 234.1bp
Average position of motif in background:287.6 +/- 208.0bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.05
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

AHR_si_HM09

Match rank:  1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGATTGCGAGC
--GTTGCGTGC
  

ENCODE UW.Motif.0304_novel

Match rank:  2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGATTGCGAGC--
CNNAGANTGNGNNNNT
  

PB0009.1_E2F3_1

Match rank:  3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGATTGCGAGC---
ATAAGGGCGCGCGAT
  

PB0008.1_E2F2_1

Match rank:  4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGATTGCGAGC------
--NTCGCGCGCCTTNNN
  

MA0282.1_CEP3

Match rank:  5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGATTGCGAGC
--TTTCCGAG-