Detailed information for motif20

P-value:1e-57
ln P-value:-1.319e+02
Information content per bp:1.639
Number of target sequences with motif:4043.0
Percentage of target sequences with motif:25.52%
Number of background sequences with motif:6588.7
Percentage of background sequences with motif:  20.26%
Average position of motif in targets:314.9 +/- 233.0bp
Average position of motif in background:278.0 +/- 210.1bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.16
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match rank:  1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TRCGCAGWCT-
---BCAGACWA
  

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match rank:  2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TRCGCAGWCT---
---CCAGACRSVB
  

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match rank:  3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TRCGCAGWCT-
---CCAGACAG
  

NRF1.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TRCGCAGWCT
TGCGCATGCG
  

MA0291.1_DAL82

Match rank:  5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TRCGCAGWCT
-GCGCACATT