Detailed information for motif1

P-value:1e-205
ln P-value:-4.740e+02
Information content per bp:1.656
Number of target sequences with motif:5079.0
Percentage of target sequences with motif:30.42%
Number of background sequences with motif:6765.9
Percentage of background sequences with motif:  20.37%
Average position of motif in targets:269.2 +/- 420.9bp
Average position of motif in background:222.0 +/- 127.3bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.35
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

POL003.1_GC-box

Match rank:  1
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCHY-
NAGCCCCGCCCCCN
  

SP1_f1_HM09

Match rank:  2
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCHY
GCCCCGCCCCC
  

SP1.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCHY-
CGGCCCCGCCCCCC
  

KLF4_f2_HM09

Match rank:  4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCHY
GCCCCGCCCN-
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  5
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCHY
GCCCCACCCA-