Detailed information for motif28

P-value:1e-41
ln P-value:-9.499e+01
Information content per bp:1.929
Number of target sequences with motif:5606.0
Percentage of target sequences with motif:11.43%
Number of background sequences with motif:4694.6
Percentage of background sequences with motif:  9.58%
Average position of motif in targets:264.0 +/- 520.0bp
Average position of motif in background:208.5 +/- 120.6bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0044.1_HMG-1

Match rank:  1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTTGTCTT-
GTTGTACTC
  

CXXC1_si_HM09

Match rank:  2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTGTCTT
CGTTGGC--
  

MA0459.1_tll

Match rank:  3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTTGTCTT--
TTTGACTTTT
  

PB0032.1_IRC900814_1

Match rank:  4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTTGTCTT----
GNNATTTGTCGTAANN
  

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match rank:  5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTGTCTT
YSTTATCT-