Detailed information for motif21

P-value:1e-51
ln P-value:-1.180e+02
Information content per bp:1.948
Number of target sequences with motif:15210.0
Percentage of target sequences with motif:31.02%
Number of background sequences with motif:13674.4
Percentage of background sequences with motif:  27.92%
Average position of motif in targets:265.5 +/- 441.8bp
Average position of motif in background:209.0 +/- 119.9bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.22
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

TLX2.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGGTAAAT--
CGGTAAGTGG
  

MSX1,2.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGGTAAAT-
CNGTAATTG
  

MA0437.1_YPR196W

Match rank:  3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGGTAAAT-
CGGAGAAAT
  

HNF1A.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGGTAAAT-------
-GGTTAATNATTANC
  

MA0046.1_HNF1A

Match rank:  5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGGTAAAT-------
-GGTTAATAATTAAC