Detailed information for motif16

P-value:1e-77
ln P-value:-1.775e+02
Information content per bp:1.908
Number of target sequences with motif:15559.0
Percentage of target sequences with motif:31.73%
Number of background sequences with motif:13666.0
Percentage of background sequences with motif:  27.90%
Average position of motif in targets:259.4 +/- 425.9bp
Average position of motif in background:210.4 +/- 118.7bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.23
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0078.1_Sox17

Match rank:  1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CATTGTGA
CTCATTGTC-
  

MA0327.1_MATA1

Match rank:  2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CATTGTGA
-ATTGTGC
  

SOX17.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CATTGTGA
CTCATTGTC-
  

SOX10_si_HM09

Match rank:  4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CATTGTGA
NCTTTGT--
  

MA0442.1_SOX10

Match rank:  5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CATTGTGA
CTTTGT--