Detailed information for motif26

P-value:1e-95
ln P-value:-2.198e+02
Information content per bp:1.660
Number of target sequences with motif:11205.0
Percentage of target sequences with motif:33.00%
Number of background sequences with motif:9439.3
Percentage of background sequences with motif:  27.85%
Average position of motif in targets:200.1 +/- 110.4bp
Average position of motif in background:198.4 +/- 116.7bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.33
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SMAD1..7,9.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGCTGSCTG------
GGCTGTCTGCCCNNC
  

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match rank:  2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGCTGSCTG-
--TWGTCTGV
  

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match rank:  3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGCTGSCTG-
--CTGTCTGG
  

SMAD2_si_HM09

Match rank:  4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCTGSCTG
GTGTCCGTCTG
  

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match rank:  5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGCTGSCTG-
VBSYGTCTGG