Detailed information for motif20

P-value:1e-115
ln P-value:-2.649e+02
Information content per bp:1.886
Number of target sequences with motif:4015.0
Percentage of target sequences with motif:11.82%
Number of background sequences with motif:2785.0
Percentage of background sequences with motif:  8.22%
Average position of motif in targets:198.3 +/- 113.5bp
Average position of motif in background:203.5 +/- 114.1bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.01
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SPI1.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CATTTCCCC-
CCACTTCCTCT
  

NANOG{mouse}.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CATTTCCCC
GGGNCCATTTCC--
  

MA0438.1_YRM1

Match rank:  3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CATTTCCCC
-ATTTCCGT
  

FEV_f1_HM09

Match rank:  4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CATTTCCCC
TNATTTCCTG
  

MA0156.1_FEV

Match rank:  5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CATTTCCCC
-ATTTCCTG