Detailed information for motif1

P-value:1e-1333
ln P-value:-3.070e+03
Information content per bp:1.608
Number of target sequences with motif:7265.0
Percentage of target sequences with motif:21.39%
Number of background sequences with motif:2647.8
Percentage of background sequences with motif:  7.81%
Average position of motif in targets:201.8 +/- 76.8bp
Average position of motif in background:196.8 +/- 116.6bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.17
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:VTGASTCATNN
VTGASTCABH-
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  2
Score:0.99
Offset:-2
Orientation:reverse strand
Alignment:--VTGASTCATNN
NNATGAGTCATN-
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-VTGASTCATNN
GATGAGTCAT--
  

MA0303.1_GCN4

Match rank:  4
Score:0.95
Offset:-6
Orientation:forward strand
Alignment:------VTGASTCATNN----
CAAGGGATGAGTCATACTTCA
  

MA0099.1_Fos

Match rank:  5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:VTGASTCATNN
GTGAGTCA---