Detailed information for motif1

P-value:1e-20
ln P-value:-4.725e+01
Information content per bp:1.701
Number of target sequences with motif:18.0
Percentage of target sequences with motif:10.29%
Number of background sequences with motif:166.8
Percentage of background sequences with motif:  0.34%
Average position of motif in targets:214.6 +/- 59.2bp
Average position of motif in background:204.4 +/- 125.3bp
Strand bias (log2 ratio + to - strand density):0.5
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HNF1B_f1_HM09

Match rank:  1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:TGGTTAATRATTAA-
-GGTTAATGATTAAC
  

HNF1A.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.90
Offset:1
Orientation:forward strand
Alignment:TGGTTAATRATTAA-
-GGTTAATNATTANC
  

HNF1A_f1_HM09

Match rank:  3
Score:0.90
Offset:1
Orientation:forward strand
Alignment:TGGTTAATRATTAA--
-GGTTAATAATTAACC
  

MA0046.1_HNF1A

Match rank:  4
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TGGTTAATRATTAA-
-GGTTAATAATTAAC
  

HNF1B_homeodomain_full_full_NRTTAATNATTAACN_dimeric

Match rank:  5
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TGGTTAATRATTAA--
-NGTTAATNATTAACN