Detailed information for motif3

P-value:1e-19
ln P-value:-4.386e+01
Information content per bp:1.704
Number of target sequences with motif:26.0
Percentage of target sequences with motif:7.08%
Number of background sequences with motif:293.6
Percentage of background sequences with motif:  0.60%
Average position of motif in targets:210.3 +/- 82.5bp
Average position of motif in background:202.5 +/- 114.8bp
Strand bias (log2 ratio + to - strand density):0.4
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ZEP1_f1_HM09

Match rank:  1
Score:0.78
Offset:3
Orientation:forward strand
Alignment:CTGGGGGAAATCCC-
---TGGGAAATCCCC
  

TF65_f2_HM09

Match rank:  2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CTGGGGGAAATCCC
---GGGAAATTCCC
  

MA0061.1_NF-kappaB

Match rank:  3
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:CTGGGGGAAATCCC
----GGAAATTCCC
  

NFKB1_f1_HM09

Match rank:  4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CTGGGGGAAATCCC
---GGGGAATCCCC
  

NFkB-p50,p52(RHD)/p50-ChIP-Chip/Homer

Match rank:  5
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CTGGGGGAAATCCC
--GGGGGAATCCCC