Detailed information for motif2

P-value:1e-15
ln P-value:-3.579e+01
Information content per bp:1.819
Number of target sequences with motif:14.0
Percentage of target sequences with motif:9.15%
Number of background sequences with motif:163.5
Percentage of background sequences with motif:  0.33%
Average position of motif in targets:180.4 +/- 66.2bp
Average position of motif in background:201.7 +/- 118.0bp
Strand bias (log2 ratio + to - strand density):1.3
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

CArG(MADS)/PUER-Srf-ChIP-Seq/Homer

Match rank:  1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TCCATAAAAGG--
-CCATATATGGNA
  

SRF.p3.SwissRegulon.nucfreq

Match rank:  2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TCCATAAAAGG
GCCCAAATAAGG
  

MF0008.1_MADS_class

Match rank:  3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TCCATAAAAGG
-CCATATATGG
  

PB0078.1_Srf_1

Match rank:  4
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TCCATAAAAGG--
TTCCATATATGGAA
  

SRF_MADS_DBD_DBD_MCCATATAWGGN_dimeric

Match rank:  5
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TCCATAAAAGG-
ACCATATATGGC