Detailed information for motif1

P-value:1e-19
ln P-value:-4.410e+01
Information content per bp:1.661
Number of target sequences with motif:32.0
Percentage of target sequences with motif:33.68%
Number of background sequences with motif:2215.2
Percentage of background sequences with motif:  4.45%
Average position of motif in targets:206.8 +/- 93.3bp
Average position of motif in background:201.0 +/- 116.7bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

CArG(MADS)/PUER-Srf-ChIP-Seq/Homer

Match rank:  1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TTKCCTTAYMAGG
-TNCCATATATGG
  

SRF_do_HM09

Match rank:  2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TTKCCTTAYMAGG-
ATGCCCATATATGGN
  

PB0078.1_Srf_1

Match rank:  3
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTKCCTTAYMAGG--
-TNCCATATATGGNA
  

SRF.p3.SwissRegulon.nucfreq

Match rank:  4
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:TTKCCTTAYMAGG--
---CCTTATTTGGGC
  

SRF_MADS_DBD_DBD_MCCATATAWGGN_dimeric

Match rank:  5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TTKCCTTAYMAGG-
--GCCATATATGGT