Detailed information for motif1

P-value:1e-22
ln P-value:-5.213e+01
Information content per bp:1.710
Number of target sequences with motif:36.0
Percentage of target sequences with motif:23.84%
Number of background sequences with motif:1337.5
Percentage of background sequences with motif:  2.75%
Average position of motif in targets:178.7 +/- 76.0bp
Average position of motif in background:199.3 +/- 117.5bp
Strand bias (log2 ratio + to - strand density):0.9
Multiplicity (# of sites on avg that occur together):  1.08
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SRF.p3.SwissRegulon.nucfreq

Match rank:  1
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CCAAATAWGG
GCCCAAATAAGG
  

MF0008.1_MADS_class

Match rank:  2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:CCAAATAWGG
CCATATATGG
  

CArG(MADS)/PUER-Srf-ChIP-Seq/Homer

Match rank:  3
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CCAAATAWGG--
CCATATATGGNA
  

SRF_MADS_DBD_DBD_MCCATATAWGGN_dimeric

Match rank:  4
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CCAAATAWGG-
ACCATATATGGC
  

PB0078.1_Srf_1

Match rank:  5
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CCAAATAWGG--
TTCCATATATGGAA