Known motif enrichment results for brain
Total target sequences = 576Total background sequences = 47612
Rank | Motif |
Name | P-value | q-value(Benjamini) | Enrichment | Motif File |
PDF |
1
|  | Sox2(HMG)/mES-Sox2-ChIP-Seq/Homer | 1e-12 | 0.0000 | 119.0 (20.66%) targets4937.4 (10.37%) backgr. | motif file (matrix) | |
2
|  | RFX(HTH)/K562-RFX3-ChIP-Seq/Homer | 1e-7 | 0.0000 | 30.0 (5.21%) targets751.5 (1.58%) backgr. | motif file (matrix) | |
3
|  | Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-7 | 0.0000 | 171.0 (29.69%) targets9653.1 (20.27%) backgr. | motif file (matrix) | |
4
|  | Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer | 1e-6 | 0.0000 | 37.0 (6.42%) targets1149.2 (2.41%) backgr. | motif file (matrix) | |
5
|  | GABPA(ETS)/Jurkat-GABPa-ChIP-Seq/Homer | 1e-6 | 0.0000 | 142.0 (24.65%) targets7850.2 (16.48%) backgr. | motif file (matrix) | |
6
|  | Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-6 | 0.0000 | 53.0 (9.20%) targets2077.5 (4.36%) backgr. | motif file (matrix) | |
7
|  | HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer | 1e-6 | 0.0000 | 64.0 (11.11%) targets2755.3 (5.78%) backgr. | motif file (matrix) | |
8
|  | ETV1(ETS)/GIST48-ETV1-ChIP-Seq/Homer | 1e-6 | 0.0000 | 193.0 (33.51%) targets11671.1 (24.50%) backgr. | motif file (matrix) | |
9
|  | GRE(NR/IR3)/A549-GR-ChIP-Seq/Homer | 1e-5 | 0.0000 | 28.0 (4.86%) targets812.2 (1.71%) backgr. | motif file (matrix) | |
10
|  | AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer | 1e-5 | 0.0000 | 75.0 (13.02%) targets3498.6 (7.35%) backgr. | motif file (matrix) | |
11
|  | Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-5 | 0.0000 | 147.0 (25.52%) targets8436.5 (17.71%) backgr. | motif file (matrix) | |
12
|  | Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | 0.0000 | 173.0 (30.03%) targets10372.6 (21.78%) backgr. | motif file (matrix) | |
13
|  | Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-5 | 0.0000 | 269.0 (46.70%) targets17752.2 (37.27%) backgr. | motif file (matrix) | |
14
|  | c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq/Homer | 1e-5 | 0.0000 | 43.0 (7.47%) targets1640.3 (3.44%) backgr. | motif file (matrix) | |
15
|  | STAT4(Stat)/CD4-Stat4-ChIP-Seq/Homer | 1e-5 | 0.0000 | 111.0 (19.27%) targets5972.4 (12.54%) backgr. | motif file (matrix) | |
16
|  | NRF1(NRF)/MCF7-NRF1-ChIP-Seq/Homer | 1e-5 | 0.0000 | 53.0 (9.20%) targets2230.6 (4.68%) backgr. | motif file (matrix) | |
17
|  | JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-5 | 0.0001 | 21.0 (3.65%) targets535.4 (1.12%) backgr. | motif file (matrix) | |
18
|  | Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-5 | 0.0001 | 113.0 (19.62%) targets6154.1 (12.92%) backgr. | motif file (matrix) | |
19
|  | CRE(bZIP)/Promoter/Homer | 1e-5 | 0.0001 | 48.0 (8.33%) targets1960.0 (4.11%) backgr. | motif file (matrix) | |
20
|  | NFY(CCAAT)/Promoter/Homer | 1e-5 | 0.0001 | 99.0 (17.19%) targets5210.1 (10.94%) backgr. | motif file (matrix) | |
21
|  | Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-5 | 0.0001 | 114.0 (19.79%) targets6310.5 (13.25%) backgr. | motif file (matrix) | |
22
|  | CArG(MADS)/PUER-Srf-ChIP-Seq/Homer | 1e-5 | 0.0001 | 39.0 (6.77%) targets1488.4 (3.12%) backgr. | motif file (matrix) | |
23
|  | ETS1(ETS)/Jurkat-ETS1-ChIP-Seq/Homer | 1e-4 | 0.0001 | 150.0 (26.04%) targets8929.5 (18.75%) backgr. | motif file (matrix) | |
24
|  | ERG(ETS)/VCaP-ERG-ChIP-Seq/Homer | 1e-4 | 0.0002 | 204.0 (35.42%) targets13112.1 (27.53%) backgr. | motif file (matrix) | |
25
|  | Rfx1(HTH)/NPC-Rfx1-ChIP-Seq/Homer | 1e-4 | 0.0002 | 39.0 (6.77%) targets1570.6 (3.30%) backgr. | motif file (matrix) | |
26
|  | ARE(NR)/LNCAP-AR-ChIP-Seq/Homer | 1e-4 | 0.0003 | 40.0 (6.94%) targets1634.3 (3.43%) backgr. | motif file (matrix) | |
27
|  | Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-4 | 0.0003 | 281.0 (48.78%) targets19252.3 (40.42%) backgr. | motif file (matrix) | |
28
|  | Stat3+il23(Stat)/CD4-Stat3-ChIP-Seq/Homer | 1e-4 | 0.0003 | 94.0 (16.32%) targets5127.2 (10.76%) backgr. | motif file (matrix) | |
29
|  | GRE/RAW264.7-GRE-ChIP-Seq/Homer | 1e-4 | 0.0003 | 33.0 (5.73%) targets1261.6 (2.65%) backgr. | motif file (matrix) | |
30
|  | X-box(HTH)/NPC-H3K4me1-ChIP-Seq/Homer | 1e-4 | 0.0004 | 23.0 (3.99%) targets736.1 (1.55%) backgr. | motif file (matrix) | |
31
|  | Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | 0.0004 | 74.0 (12.85%) targets3837.2 (8.06%) backgr. | motif file (matrix) | |
32
|  | Sp1(Zf)/Promoter/Homer | 1e-4 | 0.0005 | 90.0 (15.62%) targets4952.4 (10.40%) backgr. | motif file (matrix) | |
33
|  | USF1(HLH)/GM12878-Usf1-ChIP-Seq/Homer | 1e-4 | 0.0005 | 74.0 (12.85%) targets3877.7 (8.14%) backgr. | motif file (matrix) | |
34
|  | EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq/Homer | 1e-3 | 0.0009 | 84.0 (14.58%) targets4631.1 (9.72%) backgr. | motif file (matrix) | |
35
|  | Stat3(Stat)/mES-Stat3-ChIP-Seq/Homer | 1e-3 | 0.0009 | 75.0 (13.02%) targets4024.5 (8.45%) backgr. | motif file (matrix) | |
36
|  | Klf4(Zf)/mES-Klf4-ChIP-Seq/Homer | 1e-3 | 0.0011 | 79.0 (13.72%) targets4325.1 (9.08%) backgr. | motif file (matrix) | |
37
|  | Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | 0.0019 | 46.0 (7.99%) targets2210.7 (4.64%) backgr. | motif file (matrix) | |
38
|  | NRF1/Promoter/Homer | 1e-3 | 0.0020 | 49.0 (8.51%) targets2408.2 (5.06%) backgr. | motif file (matrix) | |
39
|  | Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq/Homer | 1e-3 | 0.0023 | 175.0 (30.38%) targets11512.6 (24.17%) backgr. | motif file (matrix) | |
40
|  | ETS(ETS)/Promoter/Homer | 1e-3 | 0.0028 | 61.0 (10.59%) targets3244.1 (6.81%) backgr. | motif file (matrix) | |
41
|  | EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer | 1e-3 | 0.0035 | 81.0 (14.06%) targets4659.2 (9.78%) backgr. | motif file (matrix) | |
42
|  | ELF1(ETS)/Jurkat-ELF1-ChIP-Seq/Homer | 1e-3 | 0.0039 | 93.0 (16.15%) targets5531.7 (11.61%) backgr. | motif file (matrix) | |
43
|  | RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer | 1e-3 | 0.0040 | 101.0 (17.53%) targets6114.5 (12.84%) backgr. | motif file (matrix) | |
44
|  | ATF3(bZIP)/K562-ATF3-ChIP-Seq/Homer | 1e-3 | 0.0043 | 37.0 (6.42%) targets1740.3 (3.65%) backgr. | motif file (matrix) | |
45
|  | PU.1(ETS)/ThioMac-PU.1-ChIP-Seq/Homer | 1e-2 | 0.0053 | 65.0 (11.28%) targets3621.0 (7.60%) backgr. | motif file (matrix) | |
46
|  | HOXA9/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | 0.0055 | 54.0 (9.38%) targets2881.0 (6.05%) backgr. | motif file (matrix) | |
47
|  | FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | 0.0055 | 39.0 (6.77%) targets1897.5 (3.98%) backgr. | motif file (matrix) | |
48
|  | Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq/Homer | 1e-2 | 0.0079 | 40.0 (6.94%) targets2006.1 (4.21%) backgr. | motif file (matrix) | |
49
|  | Znf263(Zf)/K562-Znf263-ChIP-Seq/Homer | 1e-2 | 0.0079 | 264.0 (45.83%) targets18925.3 (39.73%) backgr. | motif file (matrix) | |
50
|  | Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq/Homer | 1e-2 | 0.0090 | 27.0 (4.69%) targets1205.6 (2.53%) backgr. | motif file (matrix) | |
51
|  | Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-2 | 0.0098 | 142.0 (24.65%) targets9395.6 (19.73%) backgr. | motif file (matrix) | |
52
|  | PU.1(Ets)/humanMAC-PU.1-ChIPseq/Homer | 1e-2 | 0.0115 | 160.0 (27.78%) targets10819.1 (22.71%) backgr. | motif file (matrix) | |
53
|  | PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq/Homer | 1e-2 | 0.0139 | 20.0 (3.47%) targets828.6 (1.74%) backgr. | motif file (matrix) | |
54
|  | Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq/Homer | 1e-2 | 0.0166 | 49.0 (8.51%) targets2717.9 (5.71%) backgr. | motif file (matrix) | |
55
|  | Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq/Homer | 1e-2 | 0.0183 | 37.0 (6.42%) targets1925.5 (4.04%) backgr. | motif file (matrix) | |
56
|  | GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | 0.0183 | 104.0 (18.06%) targets6701.8 (14.07%) backgr. | motif file (matrix) | |
57
|  | GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | 0.0206 | 10.0 (1.74%) targets310.8 (0.65%) backgr. | motif file (matrix) | |
58
|  | E-box(HLH)/Promoter/Homer | 1e-2 | 0.0252 | 19.0 (3.30%) targets824.0 (1.73%) backgr. | motif file (matrix) | |
59
|  | MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | 0.0263 | 144.0 (25.00%) targets9844.9 (20.67%) backgr. | motif file (matrix) | |
60
|  | Nanog(Homeobox)/mES-Nanog-ChIP-Seq/Homer | 1e-2 | 0.0286 | 309.0 (53.65%) targets23098.7 (48.49%) backgr. | motif file (matrix) | |
61
|  | NF-E2(bZIP)/K562-NFE2-ChIP-Seq/Homer | 1e-2 | 0.0290 | 9.0 (1.56%) targets279.0 (0.59%) backgr. | motif file (matrix) | |
62
|  | BORIS(Zf)/K562-CTCFL-ChIP-Seq/Homer | 1e-2 | 0.0290 | 50.0 (8.68%) targets2893.8 (6.08%) backgr. | motif file (matrix) | |
63
|  | SCL/HPC7-Scl-ChIP-Seq/Homer | 1e-2 | 0.0310 | 407.0 (70.66%) targets31393.3 (65.91%) backgr. | motif file (matrix) | |
64
|  | Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq/Homer | 1e-2 | 0.0314 | 62.0 (10.76%) targets3763.1 (7.90%) backgr. | motif file (matrix) | |
65
|  | SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq/Homer | 1e-2 | 0.0331 | 115.0 (19.97%) targets7712.0 (16.19%) backgr. | motif file (matrix) |
