Detailed information for motif5

P-value:1e-18
ln P-value:-4.153e+01
Information content per bp:1.732
Number of target sequences with motif:33.0
Percentage of target sequences with motif:7.93%
Number of background sequences with motif:513.8
Percentage of background sequences with motif:  1.05%
Average position of motif in targets:184.9 +/- 90.0bp
Average position of motif in background:190.3 +/- 113.8bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ENCODE UW.Motif.0008

Match rank:  1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CGGTGGTTTCCT
-TGTGGTTT---
  

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:  2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGTTTCCT
NNTGTGGTTT---
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGGTGGTTTCCT
CTGTGGTTTN--
  

ENCODE UW.Motif.0182

Match rank:  4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGGTGGTTTCCT
CTNTGNNTTCNT
  

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer

Match rank:  5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGGTGGTTTCCT
GCTGTGGTTT---