Detailed information for motif2

P-value:1e-22
ln P-value:-5.272e+01
Information content per bp:1.714
Number of target sequences with motif:21.0
Percentage of target sequences with motif:7.66%
Number of background sequences with motif:133.9
Percentage of background sequences with motif:  0.28%
Average position of motif in targets:210.3 +/- 60.2bp
Average position of motif in background:197.6 +/- 127.3bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MEF2D_f1_HM09

Match rank:  1
Score:0.82
Offset:4
Orientation:forward strand
Alignment:MMNGGCTATTTWTA--
----GCTATTTTTAGC
  

MEF2A_f1_HM09

Match rank:  2
Score:0.82
Offset:2
Orientation:forward strand
Alignment:MMNGGCTATTTWTA--
--GTTCTATTTATAGC
  

MEF2B_MADS_full_full_RCTAWAAATAGM_dimeric

Match rank:  3
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:MMNGGCTATTTWTA--
----GCTATTTATAGC
  

MA0052.1_MEF2A

Match rank:  4
Score:0.79
Offset:5
Orientation:forward strand
Alignment:MMNGGCTATTTWTA-
-----CTATTTATAG
  

MEF2A_MADS_DBD_DBD_KCTAWAAATAGM_dimeric

Match rank:  5
Score:0.79
Offset:4
Orientation:reverse strand
Alignment:MMNGGCTATTTWTA--
----TCTATTTTTAGA