Detailed information for motif23

P-value:1e-15
ln P-value:-3.619e+01
Information content per bp:1.714
Number of target sequences with motif:66.0
Percentage of target sequences with motif:5.63%
Number of background sequences with motif:828.5
Percentage of background sequences with motif:  1.71%
Average position of motif in targets:204.0 +/- 86.8bp
Average position of motif in background:206.6 +/- 110.1bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.05
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

SP1.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCTCCT
CGGCCCCGCCCCCC-
  

SP1_f1_HM09

Match rank:  2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCTCCT
GCCCCGCCCCC--
  

KLF4_f2_HM09

Match rank:  3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCTCCT
GCCCCGCCCN---
  

KLF4.p3.SwissRegulon.nucfreq

Match rank:  4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCTCCT
GCCCCACCCA---
  

MA0039.2_Klf4

Match rank:  5
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCTCCT
GCCCCACCCA---