Detailed information for motif2

P-value:1e-15
ln P-value:-3.598e+01
Information content per bp:1.707
Number of target sequences with motif:33.0
Percentage of target sequences with motif:16.02%
Number of background sequences with motif:1313.3
Percentage of background sequences with motif:  2.68%
Average position of motif in targets:186.6 +/- 102.3bp
Average position of motif in background:203.8 +/- 125.2bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NANOG{mouse}.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GGAAATGATTC-
GGAAATGGNCCC
  

FEV_f1_HM09

Match rank:  2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGAAATGATTC
CAGGAAATAA---
  

PU.1-IRF/Bcell-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGAAATGATTC
CGGAAGTGAAAC
  

FEV.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGAAATGATTC
CAGGAAAT-----
  

MA0156.1_FEV

Match rank:  5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGAAATGATTC
CAGGAAAT-----