Detailed information for motif3

P-value:1e-15
ln P-value:-3.657e+01
Information content per bp:1.830
Number of target sequences with motif:8.0
Percentage of target sequences with motif:4.49%
Number of background sequences with motif:11.9
Percentage of background sequences with motif:  0.02%
Average position of motif in targets:174.4 +/- 121.4bp
Average position of motif in background:249.2 +/- 101.3bp
Strand bias (log2 ratio + to - strand density):-0.7
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer

Match rank:  1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:TGGGCCKCTGTGRT--
------GCTGTGGTTT
  

MA0002.2_RUNX1

Match rank:  2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TGGGCCKCTGTGRT--
-----GTCTGTGGTTT
  

MA0332.1_MET28

Match rank:  3
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TGGGCCKCTGTGRT
-------CTGTGG-
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TGGGCCKCTGTGRT---
-------CTGTGGTTTN
  

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match rank:  5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGGGCCKCTGTGRT---
-----NNHTGTGGTTWN