Detailed information for motif1

P-value:1e-34
ln P-value:-7.918e+01
Information content per bp:1.734
Number of target sequences with motif:72.0
Percentage of target sequences with motif:40.45%
Number of background sequences with motif:3573.5
Percentage of background sequences with motif:  7.29%
Average position of motif in targets:199.9 +/- 78.3bp
Average position of motif in background:202.7 +/- 116.4bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.15
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  1
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-TGACTCATB
ATGACTCATC
  

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  2
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--TGACTCATB
DVTGASTCAB-
  

MA0099.2_AP1

Match rank:  3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TGACTCATB
TGACTCA--
  

BATF_si_HM09

Match rank:  4
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TGACTCATB
NATGACTCAT-
  

JUND_f1_HM09

Match rank:  5
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TGACTCATB
GATGACTCATC