Detailed information for motif2

P-value:1e-27
ln P-value:-6.231e+01
Information content per bp:1.791
Number of target sequences with motif:130.0
Percentage of target sequences with motif:49.43%
Number of background sequences with motif:9535.9
Percentage of background sequences with motif:  19.41%
Average position of motif in targets:207.1 +/- 102.5bp
Average position of motif in background:200.2 +/- 118.3bp
Strand bias (log2 ratio + to - strand density):-0.2
Multiplicity (# of sites on avg that occur together):  1.14
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0099.2_AP1

Match rank:  1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TTACGCA
TGACTCA
  

MA0043.1_HLF

Match rank:  2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TTACGCA---
GGTTACGCAATA
  

MA0099.1_Fos

Match rank:  3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTACGCA-
TGACTCAC
  

JUNB_f1_HM09

Match rank:  4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTACGCA--
NTGACTCANN
  

MA0254.1_vvl

Match rank:  5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TTACGCA
-TATGCA