Detailed information for motif4

P-value:1e-19
ln P-value:-4.542e+01
Information content per bp:1.775
Number of target sequences with motif:23.0
Percentage of target sequences with motif:4.38%
Number of background sequences with motif:133.5
Percentage of background sequences with motif:  0.27%
Average position of motif in targets:210.2 +/- 89.1bp
Average position of motif in background:202.2 +/- 119.1bp
Strand bias (log2 ratio + to - strand density):-1.2
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:AGGAAATTCCAAG
-GGAAATTCCC--
  

MA0107.1_RELA

Match rank:  2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:AGGAAATTCCAAG
-GGAAATTCCC--
  

MA0101.1_REL

Match rank:  3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AGGAAATTCCAAG
-GGAAANCCCC--
  

TF65_f2_HM09

Match rank:  4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGGAAATTCCAAG
GGGAAATTCCC--
  

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq/Homer

Match rank:  5
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---AGGAAATTCCAAG
NACAGGAAAT------