Detailed information for motif22

P-value:1e-17
ln P-value:-4.017e+01
Information content per bp:1.592
Number of target sequences with motif:706.0
Percentage of target sequences with motif:58.74%
Number of background sequences with motif:22458.5
Percentage of background sequences with motif:  46.30%
Average position of motif in targets:204.8 +/- 115.4bp
Average position of motif in background:199.9 +/- 119.5bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.37
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HMGA1,2.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGAATTTTTT--
ANTGNAATTTTTTNT
  

ZN384_f1_HM09

Match rank:  2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGAATTTTTT--
NCGANTTTTTCC
  

PB0192.1_Tcfap2e_2

Match rank:  3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGAATTTTTT------
--TTTTTTTTCNNGTN
  

ADNP_IRX_SIX_ZHX.p2.SwissRegulon.nucfreq

Match rank:  4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGAATTTTTT
--AATTATT-
  

HMGA1_f1_HM09

Match rank:  5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGAATTTTTT
-GTATTTT--