Detailed information for motif1

P-value:1e-16
ln P-value:-3.914e+01
Information content per bp:1.835
Number of target sequences with motif:12.0
Percentage of target sequences with motif:13.95%
Number of background sequences with motif:125.5
Percentage of background sequences with motif:  0.26%
Average position of motif in targets:187.1 +/- 83.3bp
Average position of motif in background:194.0 +/- 102.7bp
Strand bias (log2 ratio + to - strand density):3.0
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUN_f1_HM09

Match rank:  1
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:GARGGTGACKCA-
----NTGACTCAN
  

JUND_f1_HM09

Match rank:  2
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GARGGTGACKCA--
---GATGACTCATC
  

SMRC1_f1_HM09

Match rank:  3
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:GARGGTGACKCA-
----NTGACTCAN
  

MA0099.2_AP1

Match rank:  4
Score:0.80
Offset:5
Orientation:forward strand
Alignment:GARGGTGACKCA
-----TGACTCA
  

BACH2.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GARGGTGACKCA----
-NNNATGACTCACNNN