Detailed information for motif5

P-value:1e-16
ln P-value:-3.743e+01
Information content per bp:1.720
Number of target sequences with motif:28.0
Percentage of target sequences with motif:6.67%
Number of background sequences with motif:403.1
Percentage of background sequences with motif:  0.82%
Average position of motif in targets:189.5 +/- 105.6bp
Average position of motif in background:192.1 +/- 116.3bp
Strand bias (log2 ratio + to - strand density):0.4
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0406.1_TEC1

Match rank:  1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AACATTCTTTTC
-ACATTCCC---
  

MA0277.1_AZF1

Match rank:  2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AACATTCTTTTC
---TTTCTTTTT
  

T1ISRE(IRF)/Ifnb-Exp/Homer

Match rank:  3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AACATTCTTTTC-
-ACTTTCGTTTCT
  

GRE/RAW264.7-GRE-ChIP-Seq/Homer

Match rank:  4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AACATTCTTTTC
VAGRACAKWCTGTYC
  

NR3C1.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AACATTCTTTTC--
NTAGGACATAATGTTCCC