Detailed information for motif6

P-value:1e-16
ln P-value:-3.730e+01
Information content per bp:1.701
Number of target sequences with motif:56.0
Percentage of target sequences with motif:12.67%
Number of background sequences with motif:1670.4
Percentage of background sequences with motif:  3.40%
Average position of motif in targets:205.6 +/- 105.2bp
Average position of motif in background:197.5 +/- 120.8bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.09
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

GFI1B.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AAATCATTTCA
TAAATCACTGCN
  

GFI1B_f1_HM09

Match rank:  2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AAATCATTTCA
AAATCACTGCA
  

PH0037.1_Hdx

Match rank:  3
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------AAATCATTTCA
AAGGCGAAATCATCGCA
  

GFI1_f1_HM09

Match rank:  4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAATCATTTCA
AAATCACAGC-
  

MF0010.1_Homeobox_class

Match rank:  5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAATCATTTCA
-AATTATT---