Detailed information for motif5

P-value:1e-15
ln P-value:-3.529e+01
Information content per bp:1.645
Number of target sequences with motif:19.0
Percentage of target sequences with motif:4.59%
Number of background sequences with motif:160.9
Percentage of background sequences with motif:  0.33%
Average position of motif in targets:173.3 +/- 132.1bp
Average position of motif in background:208.2 +/- 122.0bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:  1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTTG
NNTGTGGTTT--
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTTG
CTGTGGTTTN-
  

RUNX2_f1_HM09

Match rank:  3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:ATGTGGTTTTG
CTGTGGTTTGT
  

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match rank:  4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGTTTTG
NNHTGTGGTTWN-
  

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer

Match rank:  5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTTG
GCTGTGGTTT--