Detailed information for motif3

P-value:1e-17
ln P-value:-4.145e+01
Information content per bp:1.727
Number of target sequences with motif:85.0
Percentage of target sequences with motif:20.53%
Number of background sequences with motif:3493.7
Percentage of background sequences with motif:  7.12%
Average position of motif in targets:206.7 +/- 101.2bp
Average position of motif in background:197.0 +/- 122.9bp
Strand bias (log2 ratio + to - strand density):0.2
Multiplicity (# of sites on avg that occur together):  1.07
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GGAATTTCM
GGGAATTTCC
  

MA0107.1_RELA

Match rank:  2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCM
GGGAATTTCC
  

TF65_f2_HM09

Match rank:  3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCM-
GGGAATTTCCC
  

MA0101.1_REL

Match rank:  4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGAATTTCM
GGGGATTTCC
  

RELB_si_HM09

Match rank:  5
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGAATTTCM-
GGGGGATTTCCC