Detailed information for motif2

P-value:1e-15
ln P-value:-3.622e+01
Information content per bp:1.863
Number of target sequences with motif:8.0
Percentage of target sequences with motif:3.12%
Number of background sequences with motif:8.9
Percentage of background sequences with motif:  0.02%
Average position of motif in targets:283.8 +/- 83.1bp
Average position of motif in background:153.6 +/- 127.6bp
Strand bias (log2 ratio + to - strand density):0.7
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

ARID5B.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCTGTCTTBTDATT
TTGGTATTGTGNTT
  

BPTF.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCTGTCTTBTDATT
TNTGTGTTTTGNTT
  

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match rank:  3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTGTCTTBTDATT
-CTGTCTGG-----
  

SMAD4_si_HM09

Match rank:  4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTGTCTTBTDATT
TGTCTGGCC-------
  

MA0277.1_AZF1

Match rank:  5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTGTCTTBTDATT
--TTTCTTTTT---