Detailed information for motif14

P-value:1e-15
ln P-value:-3.502e+01
Information content per bp:1.646
Number of target sequences with motif:119.0
Percentage of target sequences with motif:13.87%
Number of background sequences with motif:3045.1
Percentage of background sequences with motif:  6.24%
Average position of motif in targets:220.6 +/- 108.8bp
Average position of motif in background:200.3 +/- 120.7bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.09
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HNF1A.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---AATGATTAAC-
GNTAATNATTAACC
  

HNF1A_f1_HM09

Match rank:  2
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----AATGATTAAC-
NGTTAATTATTAACC
  

MA0153.1_HNF1B

Match rank:  3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--AATGATTAAC
TTAATATTTAAC
  

MA0046.1_HNF1A

Match rank:  4
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---AATGATTAAC-
GNTAATNATTAACC
  

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq/Homer

Match rank:  5
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AATGATTAAC-
TTAATGTTTAACC