Detailed information for motif1

P-value:1e-110
ln P-value:-2.538e+02
Information content per bp:1.852
Number of target sequences with motif:286.0
Percentage of target sequences with motif:33.33%
Number of background sequences with motif:3493.6
Percentage of background sequences with motif:  7.16%
Average position of motif in targets:197.6 +/- 68.1bp
Average position of motif in background:199.3 +/- 114.6bp
Strand bias (log2 ratio + to - strand density):-0.0
Multiplicity (# of sites on avg that occur together):  1.23
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUN_f1_HM09

Match rank:  1
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-TGAGTCAT
ATGAGTCAT
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  2
Score:0.98
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTCAT
GATGAGTCAT
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  3
Score:0.97
Offset:-3
Orientation:reverse strand
Alignment:---TGAGTCAT-
NNATGAGTCATN
  

JUND_f1_HM09

Match rank:  4
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--TGAGTCAT-
GATGAGTCATC
  

JUNB_f1_HM09

Match rank:  5
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--TGAGTCAT
GATGAGTCAT