Detailed information for motif1

P-value:1e-30
ln P-value:-7.007e+01
Information content per bp:1.695
Number of target sequences with motif:69.0
Percentage of target sequences with motif:23.31%
Number of background sequences with motif:2068.4
Percentage of background sequences with motif:  4.23%
Average position of motif in targets:199.7 +/- 80.2bp
Average position of motif in background:200.5 +/- 114.6bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.12
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RTGAGTCABSVB
GATGAGTCAT---
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  2
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--RTGAGTCABSVB
NNATGAGTCATN--
  

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:RTGAGTCABSVB
VTGASTCABH--
  

JUNB_f1_HM09

Match rank:  4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTGAGTCABSVB
GATGAGTCAT---
  

BACH2.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---RTGAGTCABSVB
NNNGTGAGTCATNNN