Detailed information for motif23

P-value:1e-16
ln P-value:-3.685e+01
Information content per bp:1.674
Number of target sequences with motif:111.0
Percentage of target sequences with motif:10.21%
Number of background sequences with motif:2090.6
Percentage of background sequences with motif:  4.28%
Average position of motif in targets:201.5 +/- 94.8bp
Average position of motif in background:202.2 +/- 116.5bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

p53(p53)/mES-cMyc-ChIP-Seq/Homer

Match rank:  1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CATGCCCAGAC--
ACATGCCCGGGCAT
  

PB0060.1_Smad3_1

Match rank:  2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CATGCCCAGAC------
CAAATCCAGACATCACA
  

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match rank:  3
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:CATGCCCAGAC--
-----CCAGACAG
  

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match rank:  4
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CATGCCCAGAC----
-----CCAGACRSVB
  

SMAD3_f1_HM09

Match rank:  5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CATGCCCAGAC--
---NGCCAGACAC