Detailed information for motif1

P-value:1e-19
ln P-value:-4.436e+01
Information content per bp:1.852
Number of target sequences with motif:32.0
Percentage of target sequences with motif:38.10%
Number of background sequences with motif:2502.4
Percentage of background sequences with motif:  5.12%
Average position of motif in targets:203.5 +/- 84.1bp
Average position of motif in background:198.9 +/- 118.9bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.34
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

JUN_f1_HM09

Match rank:  1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:ATGAGTCA-
ATGAGTCAT
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTCA-
GATGAGTCAT
  

FOSL2_f1_HM09

Match rank:  3
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--ATGAGTCA-
GGATGAGTCAT
  

JUND_f1_HM09

Match rank:  4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTCA--
GATGAGTCATC
  

BATF_si_HM09

Match rank:  5
Score:0.97
Offset:0
Orientation:forward strand
Alignment:ATGAGTCA--
ATGAGTCATA