Detailed information for motif4

P-value:1e-16
ln P-value:-3.741e+01
Information content per bp:1.776
Number of target sequences with motif:36.0
Percentage of target sequences with motif:9.63%
Number of background sequences with motif:815.2
Percentage of background sequences with motif:  1.65%
Average position of motif in targets:206.8 +/- 101.1bp
Average position of motif in background:197.7 +/- 111.7bp
Strand bias (log2 ratio + to - strand density):0.3
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

GTF2I.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGGAGGGAGGAGC
-GGAGGGAGG---
  

MAZ.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGGAGGGAGGAGC
GGGGAGGG------
  

SP3_f1_HM09

Match rank:  3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGGAGGAGC-----
GGGGGGGGGCGGGGCCGGGG
  

MAZ_f1_HM09

Match rank:  4
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GGGAGGGAGGAGC
GGGGGGGGGAGGGAGGG--
  

SP1.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGGAGGGAGGAGC--
-GGGGGGCGGGGCCG