Detailed information for motif1

P-value:1e-29
ln P-value:-6.856e+01
Information content per bp:1.689
Number of target sequences with motif:95.0
Percentage of target sequences with motif:32.99%
Number of background sequences with motif:4357.7
Percentage of background sequences with motif:  8.83%
Average position of motif in targets:200.2 +/- 77.2bp
Average position of motif in background:200.8 +/- 114.8bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.24
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HIF1b(HLH)/O785-HIF1b-ChIP-Seq(GSE34871)/Homer

Match rank:  1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:RTGASTCA--
VTGASTCABH
  

MA0099.1_Fos

Match rank:  2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:RTGASTCA
GTGAGTCA
  

FOS_FOS{B,L1}_JUN{B,D}.p2.SwissRegulon.nucfreq

Match rank:  3
Score:0.97
Offset:0
Orientation:forward strand
Alignment:RTGASTCA
GTGAGTCA
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  4
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCA---
NATGACTCATNN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  5
Score:0.97
Offset:0
Orientation:forward strand
Alignment:RTGASTCA--
ATGACTCATC