Detailed information for motif11

P-value:1e-25
ln P-value:-5.800e+01
Information content per bp:1.715
Number of target sequences with motif:268.0
Percentage of target sequences with motif:25.52%
Number of background sequences with motif:6443.2
Percentage of background sequences with motif:  13.37%
Average position of motif in targets:200.7 +/- 100.9bp
Average position of motif in background:199.9 +/- 122.7bp
Strand bias (log2 ratio + to - strand density):-0.1
Multiplicity (# of sites on avg that occur together):  1.14
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PB0120.1_Foxj1_2

Match rank:  1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TGACAACA----
ATGTCACAACAACAC
  

RUNX1_f1_HM09

Match rank:  2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGACAACA--
TAACCACANA
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGACAACA-
NAAACCACAG
  

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer

Match rank:  4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGACAACA--
AAACCACAGC
  

MA0365.1_RFX1

Match rank:  5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGACAACA
TAGCAACC