Detailed information for motif28

P-value:1e-15
ln P-value:-3.601e+01
Information content per bp:1.717
Number of target sequences with motif:143.0
Percentage of target sequences with motif:8.27%
Number of background sequences with motif:1882.4
Percentage of background sequences with motif:  3.92%
Average position of motif in targets:199.1 +/- 93.1bp
Average position of motif in background:196.5 +/- 113.2bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.10
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MA0079.2_SP1

Match rank:  1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:CTTCCCCACCCCC
---CCCCGCCCCC
  

PATZ1.p2.SwissRegulon.nucfreq

Match rank:  2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CTTCCCCACCCCC
NGGCCCCTCCCCC
  

ZN148_si_HM09

Match rank:  3
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:CTTCCCCACCCCC-----
---CCCCTCCCCCACCCC
  

SP1_f1_HM09

Match rank:  4
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CTTCCCCACCCCC
--GCCCCGCCCCC
  

MZF1.p2.SwissRegulon.nucfreq

Match rank:  5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CTTCCCCACCCCC
TTCCCCCTCCCCC