motif8

Detailed information for motif8

P-value:	1e-25
ln P-value:	-5.761e+01
Information content per bp:	1.860
Number of target sequences with motif:	168.0
Percentage of target sequences with motif:	18.38%
Number of background sequences with motif:	3739.0
Percentage of background sequences with motif:	7.68%
Average position of motif in targets:	194.5 +/- 94.3bp
Average position of motif in background:	198.2 +/- 118.9bp
Strand bias (log2 ratio + to - strand density):	0.1
Multiplicity (# of sites on avg that occur together):	1.07
Motif file:	file (matrix) reverse opposite
PDF format logos:	forward logo reverse opposite

Motif logos

Forward:

Reverse:

Conservation across vertebrates

Matches to known motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:	1
Score:	0.95
Offset:	0
Orientation:	reverse strand
Alignment:	CTGTGGTTT- CTGTGGTTTN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:	2
Score:	0.95
Offset:	-1
Orientation:	reverse strand
Alignment:	-CTGTGGTTT NNTGTGGTTT

MA0002.2_RUNX1

Match rank:	3
Score:	0.94
Offset:	-2
Orientation:	forward strand
Alignment:	--CTGTGGTTT GTCTGTGGTTT

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq/Homer

Match rank:	4
Score:	0.94
Offset:	-1
Orientation:	forward strand
Alignment:	-CTGTGGTTT GCTGTGGTTT

RUNX2_f1_HM09

Match rank:	5
Score:	0.91
Offset:	0
Orientation:	forward strand
Alignment:	CTGTGGTTT-- CTGTGGTTTGT