Detailed information for motif20

P-value:1e-16
ln P-value:-3.689e+01
Information content per bp:1.702
Number of target sequences with motif:75.0
Percentage of target sequences with motif:8.21%
Number of background sequences with motif:1321.7
Percentage of background sequences with motif:  2.72%
Average position of motif in targets:197.6 +/- 112.0bp
Average position of motif in background:201.1 +/- 118.7bp
Strand bias (log2 ratio + to - strand density):-0.3
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

RUNX1..3.p2.SwissRegulon.nucfreq

Match rank:  1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:TACTTGTGGTT
--TTTGTGGTT
  

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq/Homer

Match rank:  2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:TACTTGTGGTT-
--NNTGTGGTTT
  

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match rank:  3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TACTTGTGGTT--
-NNHTGTGGTTWN
  

RUNX(Runt)/HPC7-Runx1-ChIP-Seq/Homer

Match rank:  4
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:TACTTGTGGTT--
---CTGTGGTTTN
  

RUNX2_f1_HM09

Match rank:  5
Score:0.80
Offset:3
Orientation:forward strand
Alignment:TACTTGTGGTT---
---CTGTGGTTTGT