Detailed information for motif12

P-value:1e-22
ln P-value:-5.206e+01
Information content per bp:1.658
Number of target sequences with motif:68.0
Percentage of target sequences with motif:7.44%
Number of background sequences with motif:831.0
Percentage of background sequences with motif:  1.71%
Average position of motif in targets:183.5 +/- 90.7bp
Average position of motif in background:200.2 +/- 118.1bp
Strand bias (log2 ratio + to - strand density):0.1
Multiplicity (# of sites on avg that occur together):  1.06
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

NFkB-p65-Rel(RHD)/LPS-exp/Homer

Match rank:  1
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:TKGGGAATTTCCY
--GGGAATTTCC-
  

MA0107.1_RELA

Match rank:  2
Score:0.89
Offset:2
Orientation:forward strand
Alignment:TKGGGAATTTCCY
--GGGAATTTCC-
  

TF65_f2_HM09

Match rank:  3
Score:0.88
Offset:2
Orientation:forward strand
Alignment:TKGGGAATTTCCY
--GGGAATTTCCC
  

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  4
Score:0.87
Offset:1
Orientation:forward strand
Alignment:TKGGGAATTTCCY
-NGGGGATTTCCC
  

MA0061.1_NF-kappaB

Match rank:  5
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TKGGGAATTTCCY
--GGGAATTTCC-