Detailed information for motif2

P-value:1e-16
ln P-value:-3.719e+01
Information content per bp:1.675
Number of target sequences with motif:18.0
Percentage of target sequences with motif:7.53%
Number of background sequences with motif:214.9
Percentage of background sequences with motif:  0.44%
Average position of motif in targets:190.4 +/- 108.5bp
Average position of motif in background:190.8 +/- 119.7bp
Strand bias (log2 ratio + to - strand density):0.8
Multiplicity (# of sites on avg that occur together):  1.00
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

HXB6_f1_HM09

Match rank:  1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTGCATGAATCAT-
-TGCATCAATCATT
  

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq/Homer

Match rank:  2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTGCATGAATCAT-
--NNATGAGTCATN
  

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq/Homer

Match rank:  3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TTGCATGAATCAT-
----ATGACTCATC
  

FOSL2_f1_HM09

Match rank:  4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTGCATGAATCAT
--GGATGAGTCAT
  

JUND_f1_HM09

Match rank:  5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTGCATGAATCAT-
---GATGAGTCATC