Detailed information for motif4

P-value:1e-89
ln P-value:-2.055e+02
Information content per bp:1.613
Number of target sequences with motif:676.0
Percentage of target sequences with motif:25.74%
Number of background sequences with motif:5341.9
Percentage of background sequences with motif:  11.52%
Average position of motif in targets:200.4 +/- 85.7bp
Average position of motif in background:202.2 +/- 116.7bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.14
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

MF0003.1_REL_class

Match rank:  1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GGGGDTTTCC
GGGGATTTCC
  

REL_do_HM09

Match rank:  2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GGGGDTTTCC-
TGGGGATTTCCC
  

MA0023.1_dl_2

Match rank:  3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GGGGDTTTCC
GGGGATTTCC
  

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq/Homer

Match rank:  4
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GGGGDTTTCC-
NGGGGATTTCCC
  

MA0107.1_RELA

Match rank:  5
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GGGGDTTTCC
GGGAATTTCC