Detailed information for motif36

P-value:1e-18
ln P-value:-4.195e+01
Information content per bp:1.835
Number of target sequences with motif:1603.0
Percentage of target sequences with motif:61.04%
Number of background sequences with motif:24340.1
Percentage of background sequences with motif:  52.48%
Average position of motif in targets:199.1 +/- 108.4bp
Average position of motif in background:200.5 +/- 123.9bp
Strand bias (log2 ratio + to - strand density):0.0
Multiplicity (# of sites on avg that occur together):  1.49
Motif file:file (matrix)
reverse opposite
PDF format logos:forward logo
reverse opposite

Motif logos

Forward:
Reverse:


Conservation across vertebrates

Matches to known motifs

PH0157.1_Rhox11_1

Match rank:  1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCGCTGTGAAACAC
AAGACGCTGTAAAGCGA
  

PH0158.1_Rhox11_2

Match rank:  2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGCTGTGAAACAC
AGGACGCTGTAAAGGGA
  

MA0393.1_STE12

Match rank:  3
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CCGCTGTGAAACAC
------TGAAACA-
  

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq/Homer

Match rank:  4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGCTGTGAAACAC
--NCTGTCAATCAN
  

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match rank:  5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGCTGTGAAACAC
-GSCTGTCACTCA-